I was stating the function of the lines on the trans case. In an application where the cooler is non-directional I do not believe it matters which way you plumb it. I would go for the easy and clean route. On an in radiator cooler, I think I would go in on top, out on bottom, due to the way the water also flows through, hotter on the top, cooler on the bottom. For a bolt on cooler, whatever works.